BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C09SP1|AL425670
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1262 1561 0.0
>3x_Contig1262
Length = 7137
Score = 1561 bits (787), Expect = 0.0
Identities = 788/789 (99%)
Strand = Plus / Minus
Query: 1 gcaacaacttcagcagcaacaaactcaacagcaaccattagctcctcctattatatctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3839 gcaacaacttcagcagcaacaaactcaacagcaaccattagctcctcctattatatctag 3780
Query: 61 tgctgtaaactcacatcctgctggatatacccaatcgcctagctcccgttattatcagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3779 tgctgtaaactcacatcctgctggatatacccaatcgcctagctcccgttattatcagct 3720
Query: 121 accaccaacttccacatatcaataccctcgattccaacaatatggtttgccgatgataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3719 accaccaacttccacatatcaataccctcgattccaacaatatggtttgccgatgataca 3660
Query: 181 acaacaaagccaggcttcaatatctacgccgaaatctaccaaccgcaatagctcaggttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3659 acaacaaagccaggcttcaatatctacgccgaaatctaccaaccgcaatagctcaggttc 3600
Query: 241 ttccaccaacatatcacagttcggtaccaatagtccgctggattcatttagtaacgcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3599 ttccaccaacatatcacagttcggtaccaatagtccgctggattcatttagtaacgcttc 3540
Query: 301 accaaatccaaaagagttccctttgaaaagacgtaaatcaaataaaaaatcacacttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3539 accaaatccaaaagagttccctttgaaaagacgtaaatcaaataaaaaatcacacttgac 3480
Query: 361 tccaactcaaccaaacaccactaccttctcacaacagggtcaaaggtctaaagtcacaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3479 tccaactcaaccaaacaccactaccttctcacaacagggtcaaaggtctaaagtcacaac 3420
Query: 421 aactatgtgggaagacgagaacaccttgtgttaccaagtcgaagctaatggtgtcagtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3419 aactatgtgggaagacgagaacaccttgtgttaccaagtcgaagctaatggtgtcagtgt 3360
Query: 481 agtaagaagagctgacaatgatatgatcaatggtacgaaactattgaacgttactagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 agtaagaagagctgacaatgatatgatcaatggtacgaaactattgaacgttactagaat 3300
Query: 541 gacaagaggacgcagagacggtattttgaaagctgaaaagataagacatgttgtgaaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3299 gacaagaggacgcagagacggtattttgaaagctgaaaagataagacatgttgtgaaaat 3240
Query: 601 tggttccatgcatctaaaaggtgtttggatcccatttgaragagcattagttatggcgca 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3239 tggttccatgcatctaaaaggtgtttggatcccatttgaaagagcattagttatggcgca 3180
Query: 661 gagagaaaagattgttgatcttctttatgcattgtttgtcagggacattcaatctatcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 gagagaaaagattgttgatcttctttatgcattgtttgtcagggacattcaatctatcat 3120
Query: 721 tcaacaagaatccaacggcaagtatcagcagcagactcagcagcatcaacatcatccgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 tcaacaagaatccaacggcaagtatcagcagcagactcagcagcatcaacatcatccgtt 3060
Query: 781 gatgtcatt 789
|||||||||
Sbjct: 3059 gatgtcatt 3051
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5993
Number of Sequences: 1807
Number of extensions: 5993
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)